PUBLICATIONS
[Patron Lab/Biofoundry members are in bold text; *these authors contributed equally, ✉corresponding author(s)]
2024
Hubbard K✉ , Patron NJ, Bleau J. Benitez-Alfonso Y. Underrepresentation of Black and Asian students in UK plant science. Nat. Plants (2024). doi: 10.1038/s41477-024-01778-w
Bian C*, Demirer GS*, Oz MT*, Cai Y, Witham SS, Mason GA, Shen R, Gaudinier A, Brady SM✉, Patron NJ✉. Conservation and divergence of regulatory architecture in nitrate-responsive plant gene circuits. In revision. [bioRxiv preprint]
Golubova D*, Tansley C*, Su H, Patron NJ✉ Emerging strategies for engineering natural product biosynthesis in Nicotiana benthamiana. Current Opinion in Plant Biology. 2024. 81;102611 doi: 10.1016/j.pbi.2024.102611
Tansley C, Patron NJ, Guiziou S✉. Engineering plant cell fates and functions for agriculture and industry. ACS Synthetic Biology. 2024. doi: 10.1021/acssynbio.4c00047
Juteršek M*, Gerasymenko IM*, Petek M, Haumann E, Vacas S, Kallam K, Gianoglio S, Navarro-Llopis V, Navarro Fuertes I, Patron NJ, Orzáez D, Gruden K, Warzecha H, Baebler Š✉. Transcriptome-informed identification and characterisation of Planococcus citri cis– and trans-isoprenyl diphosphate synthase genes. iScience. 2024 109441 doi: 10.1016/j.isci.2024.109441 [bioRxiv preprint]
2023
Cai YM, Witham S, Patron NJ✉. Tuning Plant Promoters Using a Simple Split Luciferase Method to Assess Transcription Factor-DNA Interactions. ACS Synth Biol. 2023 Nov 17;12(11):3482-3486. doi: 10.1021/acssynbio.3c00094 PMID: 37856867 [bioRxiv preprint]
Vollheyde K*, Dudley QM*, Yang T, Oz MT, Mancinotti D, Fedi MO, Heavens D, Linsmith G, Chhetry M, Smedley MA, Harwood WA, Swarbreck D, Geu-Flores F✉, Patron NJ✉. An improved Nicotiana benthamiana bioproduction chassis provides novel insights into nicotine biosynthesis. New Phytol. 2023 Oct;240(1):302-317. doi: 10.1111/nph.19141 PMID: 37488711 [bioRxiv preprint]
Kallam K*, Moreno-Giménez E*, Mateos-Fernández R, Tansley C, Gianoglio S, Orzaez D, Patron NJ✉. Tunable control of insect pheromone biosynthesis in Nicotiana benthamiana. Plant Biotechnol J. 2023 Jul;21(7):1440-1453. doi: 10.1111/pbi.14048 PMID: 37032497
Patron NJ✉ , Burgess SJ✉ . Editorial Overview: Engineering plants and plant products for a green bioeconomy. Curr Opin Plant Biol. 2023 Feb;71:102346. doi: 10.1016/j.pbi.2023.102346 PMID: 36774012
2022
Tomaž Š, Petek M, Lukan T, Pogačar K, Stare K, Teixeira Prates E, Jacobson DA, Zrimec J, Bajc G, Butala M, Pompe Novak M, Dudley QM, Patron N, Taler-Verčič A, Usenik A, Turk D, Prat S, Coll A, Gruden K✉. A mini-TGA protein modulates gene expression through heterogeneous association with transcription factors. Plant Physiol. 2022 Dec 15:kiac579. doi: 10.1093/plphys/kiac579 PMID: 36517238 [bioRxiv preprint]
Dudley QM, Jo S, Guerrero DAS, Chhetry M, Smedley MA, Harwood WA, Sherden NH, O’Connor SE, Caputi L, Patron NJ✉ . Reconstitution of monoterpene indole alkaloid biosynthesis in genome-engineered Nicotiana benthamiana. Commun Biol. 2022 Sep 10;5(1):949. doi: 10.1038/s42003-022-03904-w PMID: 36088516 [bioRxiv preprint]
Dudley QM, Raitskin O, Patron NJ✉. Cas9-Mediated Targeted Mutagenesis in Plants. Methods Mol Biol. 2022;2379:1-26. doi: 10.1007/978-1-0716-1791-5_1 PMID: 35188653
Mateos Fernández R, Petek M, Gerasymenko I, Juteršek M, Baebler Š, Kallam K, Moreno Giménez E, Gondolf J, Nordmann A, Gruden K, Orzaez D, Patron NJ✉. Insect pest management in the age of synthetic biology. Plant Biotechnol J. 2022 Jan;20(1):25-36. doi: 10.1111/pbi.13685 PMID: 34416790
2021
Dudley QM, Cai YM, Kallam K, Debreyne H, Carrasco Lopez JA, Patron NJ✉. Biofoundry-assisted expression and characterization of plant proteins. Synth Biol. 2021 Sep 11;6(1):ysab029. doi: 10.1093/synbio/ysab029 PMID: 34693026 [BioRxiv preprint]
Moffat AD, Elliston A, Patron NJ, Truman AW, Carrasco Lopez JA✉. A biofoundry workflow for the identification of genetic determinants of microbial growth inhibition. Synth Biol 2021 Jan 28;6(1):ysab004. doi: 10.1093/synbio/ysab004 PMID: 33623825.
Cai YM, Dudley QM, Patron NJ✉. Measurement of Transgene Copy Number in Plants Using Droplet Digital PCR. Bio Protoc. 2021 Jul 5;11(13):e4075. doi: 10.21769/BioProtoc.4075 PMID: 34327272
EFSA Panel on Genetically Modified Organisms (GMO), Naegeli H, Bresson JL, Dalmay T, Dewhurst IC, Epstein MM, Firbank LG, Guerche P, Hejatko J, Moreno FJ, Nogue F, Rostoks N, Sanchez Serrano JJ, Savoini G, Veromann E, Veronesi F, Casacuberta J, De Schrijver A, Messean A, Patron N, Zurbriggen M, Alvarez F, Devos Y, Gennaro A, Streissl F, Papadopoulou N, Mullins E. Evaluation of existing guidelines for their adequacy for the molecular characterisation and environmental risk assessment of genetically modified plants obtained through synthetic biology. EFSA J. 2021 Feb 5;19(2):e06301. doi: 10.2903/j.efsa.2021.6301 PMID: 33598046.
Kemp L✉, Aldridge DC, Booy O, Bower H, Browne D, Burgmann M, Burt A, Cunningham AA, Dando M, Dick JTA, Dye C, Weiss Evans S, Gallardo B, Godfray HCJ, Goodfellow I, Gubbins S, Holt LA, Jones KE, Kandil H, Martin P, McCaughan M, McLeish C, Meany T, Millett K, ÓhÉigeartaigh SS, Patron NJ, Rhodes C, Roy HE, Shackelford G, Smith D, Spence N, Steiner H, Sundaram LS, Voeneky S, Walker JR, Watkins H, Whitby S, Wood J, Sutherland WJ. 80 questions for UK biological security. PLoS One. 2021 Jan 6;16(1):e0241190. doi: 10.1371/journal.pone.0241190 PMID: 33406134
2020
Cai YM, Kallam K, Tidd H, Gendarini G, Salzman A, Patron NJ✉. Rational design of minimal synthetic promoters for plants. Nucleic Acids Res. 2020 Dec 2;48(21):11845-11856. doi: 10.1093/nar/gkaa682 PMID: 32856047. [bioRxivpreprint]
Cai YM, Carrasco Lopez JA, Patron NJ✉. Phytobricks: Manual and Automated Assembly of Constructs for Engineering Plants. Methods Mol Biol. 2020;2205:179-199. doi: 10.1007/978-1-0716-0908-8_11 PMID: 32809200
Hatta MAM, Arora S, Ghosh S, Matny O, Smedley MA, Yu G, Chakraborty S, Bhatt D, Xia X, Steuernagel B, Richardson T, Mago R, Lagudah ES, Patron NJ, Ayliffe M, Rouse MN, Harwood WA, Periyannan S, Steffenson BJ, Wulff BBH✉. The wheat Sr22, Sr33, Sr35 and Sr45 genes confer resistance against stem rust in barley. Plant Biotechnol J. 2021 Feb;19(2):273-284. doi: 10.1111/pbi.13460 PMID: 32744350. [bioRxiv Preprint]
Khumsupan P, Kozlowska MA, Orr DJ, Andreou AI, Nakayama N, Patron N, Carmo-Silva E, McCormick AJ✉. Generating and characterizing single- and multigene mutants of the Rubisco small subunit family in Arabidopsis. J Exp Bot. 2020 Oct 7;71(19):5963-5975. doi: 10.1093/jxb/eraa316 PMID: 32734287
Kemp L✉, Adam L, Boehm CR, Breitling R, Casagrande R, Dando M, Djikeng A, Evans NG, Hammond R, Hills K, Holt LA, Kuiken T, Markotić A, Millett P, Napier JA, Nelson C, ÓhÉigeartaigh SS, Osbourn A, Palmer M, Patron NJ, Perello E, Piyawattanametha W, Restrepo-Schild V, Rios-Rojas C, Rhodes C, Roessing A, Scott D, Shapira P, Simuntala C, Smith RD, Sundaram LS, Takano E, Uttmark G, Wintle B, Zahra NB, Sutherland WJ. Bioengineering horizon scan 2020. Elife. 2020 May 29;9:e54489. doi: 10.7554/eLife.54489 PMID: 32479263
Patron NJ✉. Beyond natural: synthetic expansions of botanical form and function. New Phytol. 2020 Jul;227(2):295-310. doi: 10.1111/nph.16562 PMID: 32239523
Sauret-Güeto S, Frangedakis E, Silvestri L, Rebmann M, Tomaselli M, Markel K, Delmans M, West A, Patron NJ, Haseloff J✉. Systematic Tools for Reprogramming Plant Gene Expression in a Simple Model, Marchantia polymorpha. ACS Synth Biol. 2020 Apr 17;9(4):864-882. doi: 10.1021/acssynbio.9b00511 Epub 2020 Apr 2. PMID: 32163700. [bioRxiv preprint]
2019
Hillson N✉, Caddick M, Cai Y, Carrasco JA, Chang MW, Curach NC, Bell DJ, Le Feuvre R, Friedman DC, Fu X, Gold ND, Herrgård MJ, Holowko MB, Johnson JR, Johnson RA, Keasling JD, Kitney RI, Kondo A, Liu C, Martin VJJ, Menolascina F, Ogino C, Patron NJ, Pavan M, Poh CL, Pretorius IS, Rosser SJ, Scrutton NS, Storch M, Tekotte H, Travnik E, Vickers CE, Yew WS, Yuan Y, Zhao H, Freemont PS*. Building a global alliance of biofoundries. Nat Commun. 2019 May 9;10(1):2040. doi: 10.1038/s41467-019-10079-2 PMID: 31068573
Tuncel A, Corbin KR, Ahn-Jarvis J, Harris S, Hawkins E, Smedley MA, Harwood W, Warren FJ, Patron NJ✉, Smith AM✉. Cas9-mediated mutagenesis of potato starch-branching enzymes generates a range of tuber starch phenotypes. Plant Biotechnol J. 2019 Dec;17(12):2259-2271. doi: 10.1111/pbi.13137 PMID: 31033104
Stephenson MJ, Reed J, Patron NJ, Lomonossoff G, Osbourn A✉ (2019) Engineering tobacco for plant natural product production. Comprehensive Natural Products III (Third Edition) Chemistry and Biology 6:244-262
Kuhaudomlarp S, Pergolizzi G, Patron NJ, Henrissat B, Field RA✉. Unraveling the subtleties of β-(1→3)-glucan phosphorylase specificity in the GH94, GH149, and GH161 glycoside hydrolase families. J Biol Chem. 2019 Apr 19;294(16):6483-6493. doi: 10.1074/jbc.RA119.007712 PMID: 30819804
Bickerton P✉, Patron NJ (2019) An edit for good? Lab News
Raitskin O, Schudoma C, West A, Patron NJ✉. Comparison of efficiency and specificity of CRISPR-associated (Cas) nucleases in plants: An expanded toolkit for precision genome engineering. PLoS One. 2019 Feb 27;14(2):e0211598. doi: 10.1371/journal.pone.0211598 PMID: 30811422. [bioRxiv preprint]
Pollak B, Cerda A, Delmans M, Álamos S, Moyano T, West A, Gutiérrez RA, Patron NJ, Federici F, Haseloff J✉. Loop assembly: a simple and open system for recursive fabrication of DNA circuits. New Phytol. 2019 Apr;222(1):628-640. doi: 10.1111/nph.15625 PMID: 30521109. [bioRxiv preprint]
2018
Kahl L✉, Molloy J, Patron N, Matthewman C, Haseloff J, Grewal D, Johnson R, Endy D✉. Opening options for material transfer. Nat Biotechnol. 2018 Oct 11;36(10):923-927 doi: 10.1038/nbt.4263. PMID: 30307930
Stewart CN Jr✉, Patron N, Hanson AD, Jez JM. Plant metabolic engineering in the synthetic biology era: plant chassis selection. Plant Cell Rep. 2018 Oct;37(10):1357-1358 doi: 10.1007/s00299-018-2342-1. PMID: 30196331
Ran Y, Patron N, Kay P, Wong D, Buchanan M, Cao YY, Sawbridge T, Davies JP, Mason J, Webb SR, Spangenberg G, Ainley WM, Walsh TA, Hayden MJ✉. Zinc finger nuclease-mediated precision genome editing of an endogenous gene in hexaploid bread wheat (Triticum aestivum) using a DNA repair template. Plant Biotechnol J. 2018 Dec;16(12):2088-2101 doi: 10.1111/pbi.12941. PMID: 29734518
Halewood M✉, Chiurugwi T, Sackville Hamilton R, Kurtz B, Marden E, Welch E, Michiels F, Mozafari J, Sabran M, Patron N, Kersey P, Bastow R, Dorius S, Dias S, McCouch S, Powell W. Plant genetic resources for food and agriculture: opportunities and challenges emerging from the science and information technology revolution. New Phytol. 2018 Mar;217(4):1407-1419. doi: 10.1111/nph.14993 PMID: 29359808
Vazquez-Vilar M, Orzaez D, Patron N✉. DNA assembly standards: Setting the low-level programming code for plant biotechnology. Plant Sci. 2018 Aug;273:33-41 doi: 10.1016/j.plantsci.2018.02.024 PMID: 29907307
Kuhaudomlarp S, Patron NJ, Henrissat B, Rejzek M, Saalbach G, Field RA✉. Identification of Euglena gracilis β-1,3-glucan phosphorylase and establishment of a new glycoside hydrolase (GH) family GH149. J Biol Chem. 2018 Feb 23;293(8):2865-2876. doi: 10.1074/jbc.RA117.000936 PMID: 29317507
2017
Volpi e Silva N and Patron NJ✉(2017) CRISPR-based tools for plant genome engineering. Emerging Topics in Life Sciences 1: 135–149
Owen C, Patron NJ, Huang A, Osbourn A✉. Harnessing plant metabolic diversity. Curr Opin Chem Biol. 2017 Oct;40:24-30. doi: 10.1016/j.cbpa.2017.04.015 PMID: 28527344
Patron NJ✉ (2017) Feeding the Future: The Case for Open Source Technology and an Inclusive Plant Bioengineering Community. SynBioLEAP
Wintle BC✉, Boehm CR, Rhodes C, Molloy JC, Millett P, Adam L, Breitling R, Carlson R, Casagrande R, Dando M, Doubleday R, Drexler E, Edwards B, Ellis T, Evans NG, Hammond R, Haseloff J, Kahl L, Kuiken T, Lichman BR, Matthewman CA, Napier JA, ÓhÉigeartaigh SS, Patron NJ, Perello E, Shapira P, Tait J, Takano E, Sutherland WJ. A transatlantic perspective on 20 emerging issues in biological engineering. Elife. 2017 Nov 14;6:e30247. doi: 10.7554/eLife.30247 PMID: 29132504
D’Amore R, Johnson J, Haldenby S, Hall N, Hughes M, Joynson R, Kenny JG, Patron N, Hertz-Fowler C, Hall A✉. SMRT Gate: A method for validation of synthetic constructs on Pacific Biosciences sequencing platforms. Biotechniques. 2017 Jul 1;63(1):13-20. doi: 10.2144/000114565 PMID: 28701143
Boehm CR, Pollak B, Purswani N, Patron N, Haseloff J✉. Synthetic Botany. Cold Spring Harb Perspect Biol. 2017 Jul 5;9(7):a023887. doi: 10.1101/cshperspect.a023887 PMID: 28246181
2016
Richardson S and Patron NJ✉ (2016) Playing God in a sandbox. Microbiology.
Patron NJ✉ (2016) Synthetic Plants in Synthetic Biology Handbook Ed: Darren Nesbeth. CRC Press. ISBN 978146656847.
Patron NJ✉(2016) Synthetic Biology and Gene Cloning In Encyclopedia of Applied Plant Sciences 2nd Edition. Editors-in-Chief: Brian Thomas, Denis J Murphy, Brian G Murray. Academic Press. eBook ISBN: 9780123948083 Hardcover ISBN: 9780123948076
Raitskin O, Patron NJ✉. Multi-gene engineering in plants with RNA-guided Cas9 nuclease. Curr Opin Biotechnol. 2016 Feb;37:69-75. doi: 10.1016/j.copbio.2015.11.008 PMID: 26707469
Patron NJ✉. Blueprints for green biotech: development and application of standards for plant synthetic biology. Biochem Soc Trans. 2016 Jun 15;44(3):702-8. doi: 10.1042/BST20160044. PMID: 27284031
Patron NJ✉. DNA Assembly for Plant Biology. Curr Protoc Plant Biol. 2016 Dec;1(4):604-616. doi: 10.1002/cppb.20038. PMID: 31725968
NICOLA’S PREVIOUS PUBLICATIONS
Patron NJ✉, Orzaez D, Marillonnet S, Warzecha H, Matthewman C, Youles M, Raitskin O, Leveau A, Farré G, Rogers C, Smith A, Hibberd J, Webb AA, Locke J, Schornack S, Ajioka J, Baulcombe DC, Zipfel C, Kamoun S, Jones JD, Kuhn H, Robatzek S, Van Esse HP, Sanders D, Oldroyd G, Martin C, Field R, O’Connor S, Fox S, Wulff B, Miller B, Breakspear A, Radhakrishnan G, Delaux PM, Loqué D, Granell A, Tissier A, Shih P, Brutnell TP, Quick WP, Rischer H, Fraser PD, Aharoni A, Raines C, South PF, Ané JM, Hamberger BR, Langdale J, Stougaard J, Bouwmeester H, Udvardi M, Murray JA, Ntoukakis V, Schäfer P, Denby K, Edwards KJ, Osbourn A, Haseloff J. Standards for plant synthetic biology: a common syntax for exchange of DNA parts. New Phytol. 2015 Oct;208(1):13-9. doi: 10.1111/nph.13532 PMID: 26171760
Parry G✉, Patron N, Bastow R, Matthewman C. Meeting report: GARNet/OpenPlant CRISPR-Cas workshop. Plant Methods. 2015 Jan 27;12:6. doi: 10.1186/s13007-016-0104-z. PMID: 26823675
Belhaj K, Chaparro-Garcia A, Kamoun S, Patron NJ, Nekrasov V✉. Editing plant genomes with CRISPR/Cas9. Curr Opin Biotechnol. 2015 Apr;32:76-84. doi: 10.1016/j.copbio.2014.11.007 PMID: 25437637
Lawrenson T, Shorinola O, Stacey N, Li C, Østergaard L, Patron N, Uauy C, Harwood W✉. Induction of targeted, heritable mutations in barley and Brassica oleracea using RNA-guided Cas9 nuclease. Genome Biol. 2015 Nov 30;16:258. doi: 10.1186/s13059-015-0826-7 PMID: 26616834
Patron NJ✉. DNA assembly for plant biology: techniques and tools. Curr Opin Plant Biol. 2014 Jun;19:14-9. doi: 10.1016/j.pbi.2014.02.004 PMID: 24632010
Engler C, Youles M, Gruetzner R, Ehnert TM, Werner S, Jones JD, Patron NJ✉, Marillonnet S✉. A Golden Gate modular cloning toolbox for plants. ACS Synth Biol. 2014 Nov 21;3(11):839-43. doi: 10.1021/sb4001504 PMID: 24933124
Spangenberg GS, Forster J, Cogan N, Ran Y, Shinozuka H, Patron NJ, Pembleton L. Manipulation of self-incompatibility in plants. Patent #WO2014127414A1
Giordano A, Liu Z, Panter SN, Dimech AM, Shang Y, Wijesinghe H, Fulgueras K, Ran Y, Mouradov A, Rochfort S, Patron NJ, Spangenberg GC*. Reduced lignin content and altered lignin composition in the warm season forage grass Paspalum dilatatum by down-regulation of a Cinnamoyl CoA reductase gene. Transgenic Res. 2014 Jun;23(3):503-17. doi: 10.1007/s11248-014-9784-1 PMID: 24504635
Ran Y, Patron NJ, Yu Q, Georges S, Mason J, Spangenberg GC✉(2014) Agrobacterium-mediated transformation of Lolium rigidum Gaud. Plant Cell, Tissue and Organ Culture 1181(1):67-75
Santelia D, Kötting O, Seung D, Schubert M, Thalmann M, Bischof S, Meekins DA, Lutz A, Patron N, Gentry MS, Allain FH, Zeeman SC✉. The phosphoglucan phosphatase like sex Four2 dephosphorylates starch at the C3-position in Arabidopsis. Plant Cell. 2011 Nov;23(11):4096-111. doi: 10.1105/tpc.111.092155 PMID: 22100529
Wilson-O’Brien AL, Patron NJ, Rogers S✉. Evolutionary ancestry and novel functions of the mammalian glucose transporter (GLUT) family. BMC Evol Biol. 2010 May 21;10:152. doi: 10.1186/1471-2148-10-152 PMID: 20487568
Elias M, Patron NJ, Keeling PJ✉. The RAB family GTPase Rab1A from Plasmodium falciparum defines a unique paralog shared by chromalveolates and rhizaria. J Eukaryot Microbiol. 2009 Jul-Aug;56(4):348-56. doi: 10.1111/j.1550-7408.2009.00408.x PMID: 19602080
Patron NJ, Durnford DG, Kopriva S✉. Sulfate assimilation in eukaryotes: fusions, relocations and lateral transfers. BMC Evol Biol. 2008 Feb 4;8:39. doi: 10.1186/1471-2148-8-39 PMID: 18248682
Patron NJ, Waller RF, Cozijnsen AJ, Straney DC, Gardiner DM, Nierman WC, Howlett BJ✉. Origin and distribution of epipolythiodioxopiperazine (ETP) gene clusters in filamentous ascomycetes. BMC Evol Biol. 2007 Sep 26;7:174. doi: 10.1186/1471-2148-7-174 PMID: 17897469
Kopriva S✉, Patron NJ, Leustek T, Keeling P (2008) Phylogenetic analysis of sulfate assimilation and cysteine biosynthesis in phototrophic organisms. In: Advances in Photosynthesis and Respiration Vol. 27 – Sulfur metabolism in phototrophic organisms. Hell R., Leustek T., Dahl C., Knaff D. eds. Springer, Dordrecht, pp. 33-60
Patron NJ✉, Waller RF. Transit peptide diversity and divergence: A global analysis of plastid targeting signals. Bioessays. 2007 Oct;29(10):1048-58. doi: 10.1002/bies.20638 PMID: 17876808
Rogers MB, Patron NJ, Keeling PJ✉. Horizontal transfer of a eukaryotic plastid-targeted protein gene to cyanobacteria. BMC Biol. 2007 Jun 20;5:26. doi: 10.1186/1741-7007-5-26 PMID: 17584924
Patron NJ, Inagaki Y, Keeling PJ✉. Multiple gene phylogenies support the monophyly of cryptomonad and haptophyte host lineages. Curr Biol. 2007 May 15;17(10):887-91. doi: 10.1016/j.cub.2007.03.069 PMID: 17462896
Eisen JA✉, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK Jr, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA, Krieger CJ, del Toro C, Ryder HF, Williamson SC, Barbeau RA, Hamilton EP, Orias E. Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote. PLoS Biol. 2006 Sep;4(9):e286. doi: 10.1371/journal.pbio.0040286 PMID: 16933976
Gile GH, Patron NJ, Keeling PJ✉. EFL GTPase in cryptomonads and the distribution of EFL and EF-1alpha in chromalveolates. Protist. 2006 Oct;157(4):435-44. doi: 10.1016/j.protis.2006.06.002 PMID: 16904374
Patron NJ, Rogers MB, Keeling PJ✉. Comparative rates of evolution in endosymbiotic nuclear genomes. BMC Evol Biol. 2006 Jun 14;6:46. doi: 10.1186/1471-2148-6-46 PMID: 16772046
Waller RF, Patron NJ, Keeling PJ✉. Phylogenetic history of plastid-targeted proteins in the peridinin-containing dinoflagellate Heterocapsa triquetra. Int J Syst Evol Microbiol. 2006 Jun;56(Pt 6):1439-1447. doi: 10.1099/ijs.0.64061-0 PMID: 16738125.
Patron NJ, Waller RF, Keeling PJ✉. A tertiary plastid uses genes from two endosymbionts. J Mol Biol. 2006 Apr 14;357(5):1373-82. doi: 10.1016/j.jmb.2006.01.084 PMID: 16490209
Patron NJ, Keeling PJ✉ (2005) Common evolutionary origin of starch biosynthetic enzymes in green and red algae. Journal of Phycology 41, 1131-1141
Williams BA, Slamovits CH, Patron NJ, Fast NM, Keeling PJ✉. A high frequency of overlapping gene expression in compacted eukaryotic genomes. Proc Natl Acad Sci U S A. 2005 Aug 2;102(31):10936-41. doi: 10.1073/pnas.0501321102 PMID: 16037215.
Takishita K, Patron NJ, Ishida K, Maruyama T, Keeling PJ✉. A transcriptional fusion of genes encoding glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and enolase in dinoflagellates. J Eukaryot Microbiol. 2005 Jul-Aug;52(4):343-8. doi: 10.1111/j.1550-7408.2005.00042x PMID: 16014012
Patron NJ, Waller RF, Archibald JM, Keeling PJ✉. Complex protein targeting to dinoflagellate plastids. J Mol Biol. 2005 May 13;348(4):1015-24. doi: 10.1016/j.jmb.2005.03.030 PMID: 15843030
Stevens M, Patron NJ, Dolby CA, Weekes R, Hallsworth PB, Lemaire O, Smith HG✉ (2005) Distribution and properties of geographically distinct isolates of sugar beet yellowing viruses. Plant Pathology 54, 100-107
Patron NJ, Rogers MB, Keeling PJ✉. Gene replacement of fructose-1,6-bisphosphate aldolase supports the hypothesis of a single photosynthetic ancestor of chromalveolates. Eukaryot Cell. 2004 Oct;3(5):1169-75. doi: 10.1128/EC.3.5.1169-1175.2004 PMID: 15470245
Patron NJ*, Greber B*, Fahy BF, Laurie DA, Parker ML, Denyer K✉. The lys5 mutations of barley reveal the nature and importance of plastidial ADP-Glc transporters for starch synthesis in cereal endosperm. Plant Physiol. 2004 Aug;135(4):2088-97. doi: 10.1104/pp.104.045203 PMID: 15299120
Johnson PE*, Patron NJ*, Bottrill AR, Dinges JR, Fahy BF, Parker ML, Waite DN, Denyer K✉. A low-starch barley mutant, risø 16, lacking the cytosolic small subunit of ADP-glucose pyrophosphorylase, reveals the importance of the cytosolic isoform and the identity of the plastidial small subunit. Plant Physiol. 2003 Feb;131(2):684-96. doi: 10.1104/pp.013094 PMID: 12586892
Patron NJ, Smith AM, Fahy BF, Hylton CM, Naldrett MJ, Rossnagel BG, Denyer K*. The altered pattern of amylose accumulation in the endosperm of low-amylose barley cultivars is attributable to a single mutant allele of granule-bound starch synthase I with a deletion in the 5′-non-coding region. Plant Physiol. 2002 Sep;130(1):190-8. doi: 10.1104/pp.005454 PMID: 12226499